BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F11LP1|AL426720
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1748 1610 0.0
>3x_Contig1748
Length = 22566
Score = 1610 bits (812), Expect = 0.0
Identities = 819/820 (99%), Gaps = 1/820 (0%)
Strand = Plus / Plus
Query: 1 tcttagtgtaccattcaaaacagcaagctctctcaactgacctcgcttcaaatcattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6717 tcttagtgtaccattcaaaacagcaagctctctcaactgacctcgcttcaaatcattttg 6776
Query: 61 accttcaggtgaagtgatcgccttgacgactatactttcacaggccttgattcctaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6777 accttcaggtgaagtgatcgccttgacgactatactttcacaggccttgattcctaatgg 6836
Query: 121 tattttgtcctctacatctgcaataatgatgcagtgcaatggctcattcatattcattgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6837 tattttgtcctctacatctgcaataatgatgcagtgcaatggctcattcatattcattgc 6896
Query: 181 acctttcggtaggtctgcagcagctttacctgatctgacggatcctcgtcctctgatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6897 acctttcggtaggtctgcagcagctttacctgatctgacggatcctcgtcctctgatgga 6956
Query: 241 aatcttacatcccgattcttgttgaagcttcttcaaagtattaccacgaggccctagtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6957 aatcttacatcccgattcttgttgaagcttcttcaaagtattaccacgaggccctagtaa 7016
Query: 301 tagccccacaaaatttatatccggataatcctccgtagg-atgtaatatttgtcttgaaa 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 7017 tagccccacaaaatttatatccggataatcctccgtagggatgtaatatttgtcttgaaa 7076
Query: 360 ccttgtaggtcttctatagtcgtccggtgtaacgaagtttggtatcattttcagagcaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7077 ccttgtaggtcttctatagtcgtccggtgtaacgaagtttggtatcattttcagagcaat 7136
Query: 420 ctcaactagacgatgtctttcttcttccaattttcttttataccgttgttccttagtgtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7137 ctcaactagacgatgtctttcttcttccaattttcttttataccgttgttccttagtgtt 7196
Query: 480 ggttcttctaccacgagcatcgtacacaggcggtggggaaggggaccttgcccttccaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7197 ggttcttctaccacgagcatcgtacacaggcggtggggaaggggaccttgcccttccaga 7256
Query: 540 aggaggagtcaaatcattcgatctaagctttgcagtgatttctgcaattctgaacatcac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7257 aggaggagtcaaatcattcgatctaagctttgcagtgatttctgcaattctgaacatcac 7316
Query: 600 ctggtatgctgtctcatgttccggcgcgagaaagccattaattactgcaggtaatcctat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7317 ctggtatgctgtctcatgttccggcgcgagaaagccattaattactgcaggtaatcctat 7376
Query: 660 ttgttcaaagacggcattttcacgcgcttttgctccccataatgcatcatattgattatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7377 ttgttcaaagacggcattttcacgcgcttttgctccccataatgcatcatattgattatc 7436
Query: 720 agtacgacctctttccattattatgatacttagatgttactgctagcttaaaggcctcct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7437 agtacgacctctttccattattatgatacttagatgttactgctagcttaaaggcctcct 7496
Query: 780 tattatgttattttccgtgcggtgagttaatgttttagtt 819
||||||||||||||||||||||||||||||||||||||||
Sbjct: 7497 tattatgttattttccgtgcggtgagttaatgttttagtt 7536
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5627
Number of Sequences: 1807
Number of extensions: 5627
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)